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              grep rough audit - static analysis tool
                  v2.8 written by @Wireghoul
=================================[justanotherhacker.com]===
r-cran-rstan-2.21.2/vignettes/rstan.Rmd-330-
r-cran-rstan-2.21.2/vignettes/rstan.Rmd:331:in which `N` can be $1$ as a special case. So if we know that `N` is always 
r-cran-rstan-2.21.2/vignettes/rstan.Rmd-332-larger than $1$, we can use a vector of length `N` in R as the data input for 
r-cran-rstan-2.21.2/vignettes/rstan.Rmd-333-`y` (for example, a vector created by `y <- rnorm(N)`). If we want to prevent 
r-cran-rstan-2.21.2/vignettes/rstan.Rmd:334:RStan from treating the input data for `y` as a scalar when $N`$ is $1$, we
r-cran-rstan-2.21.2/vignettes/rstan.Rmd-335-need to explicitly make it an array as the following R code shows:
##############################################
r-cran-rstan-2.21.2/vignettes/rstan.Rmd-426-per iteration. In this case, it is a non-issue because each chain has a 
r-cran-rstan-2.21.2/vignettes/rstan.Rmd:427:`treedepth__` of at most $7$ and the default is $10$. But if any `treedepth__` 
r-cran-rstan-2.21.2/vignettes/rstan.Rmd-428-were $11$, then it would be wise to increase the limit by passing 
##############################################
r-cran-rstan-2.21.2/vignettes/stanfit-objects.Rmd-132-
r-cran-rstan-2.21.2/vignettes/stanfit-objects.Rmd:133:In `fit_summary$summary` all chains are merged whereas `fit_summary$c_summary`
r-cran-rstan-2.21.2/vignettes/stanfit-objects.Rmd-134-contains summaries for each chain individually. Typically we want the 
##############################################
r-cran-rstan-2.21.2/R/stanc.R-114-  if (any(!grepl("#include[[:space:]]+<", model_code)))
r-cran-rstan-2.21.2/R/stanc.R:115:    model_code <- gsub('#include (.*$)', '#include "\\1"', model_code)
r-cran-rstan-2.21.2/R/stanc.R-116-  unprocessed <- tempfile(fileext = ".stan")
##############################################
r-cran-rstan-2.21.2/R/stanmodel-class.R-103-  mod <- get("module", envir = object@dso@.CXXDSOMISC, inherits = FALSE)
r-cran-rstan-2.21.2/R/stanmodel-class.R:104:  eval(call("$", mod, paste('stan_fit4', model_cppname, sep = '')))
r-cran-rstan-2.21.2/R/stanmodel-class.R-105-}
##############################################
r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-330-
r-cran-rstan-2.21.2/inst/doc/rstan.Rmd:331:in which `N` can be $1$ as a special case. So if we know that `N` is always 
r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-332-larger than $1$, we can use a vector of length `N` in R as the data input for 
r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-333-`y` (for example, a vector created by `y <- rnorm(N)`). If we want to prevent 
r-cran-rstan-2.21.2/inst/doc/rstan.Rmd:334:RStan from treating the input data for `y` as a scalar when $N`$ is $1$, we
r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-335-need to explicitly make it an array as the following R code shows:
##############################################
r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-426-per iteration. In this case, it is a non-issue because each chain has a 
r-cran-rstan-2.21.2/inst/doc/rstan.Rmd:427:`treedepth__` of at most $7$ and the default is $10$. But if any `treedepth__` 
r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-428-were $11$, then it would be wise to increase the limit by passing 
##############################################
r-cran-rstan-2.21.2/inst/doc/stanfit-objects.Rmd-132-
r-cran-rstan-2.21.2/inst/doc/stanfit-objects.Rmd:133:In `fit_summary$summary` all chains are merged whereas `fit_summary$c_summary`
r-cran-rstan-2.21.2/inst/doc/stanfit-objects.Rmd-134-contains summaries for each chain individually. Typically we want the 
##############################################
r-cran-rstan-2.21.2/debian/tests/run-unit-test-6-if [ "$AUTOPKGTEST_TMP" = "" ] ; then
r-cran-rstan-2.21.2/debian/tests/run-unit-test:7:    AUTOPKGTEST_TMP=`mktemp -d /tmp/${debname}-test.XXXXXX`
r-cran-rstan-2.21.2/debian/tests/run-unit-test-8-    trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM