=========================================================== .___ __ __ _________________ __ __ __| _/|__|/ |_ / ___\_` __ \__ \ | | \/ __ | | \\_ __\ / /_/ > | \// __ \| | / /_/ | | || | \___ /|__| (____ /____/\____ | |__||__| /_____/ \/ \/ grep rough audit - static analysis tool v2.8 written by @Wireghoul =================================[justanotherhacker.com]=== r-cran-rstan-2.21.2/vignettes/rstan.Rmd-330- r-cran-rstan-2.21.2/vignettes/rstan.Rmd:331:in which `N` can be $1$ as a special case. So if we know that `N` is always r-cran-rstan-2.21.2/vignettes/rstan.Rmd-332-larger than $1$, we can use a vector of length `N` in R as the data input for r-cran-rstan-2.21.2/vignettes/rstan.Rmd-333-`y` (for example, a vector created by `y <- rnorm(N)`). If we want to prevent r-cran-rstan-2.21.2/vignettes/rstan.Rmd:334:RStan from treating the input data for `y` as a scalar when $N`$ is $1$, we r-cran-rstan-2.21.2/vignettes/rstan.Rmd-335-need to explicitly make it an array as the following R code shows: ############################################## r-cran-rstan-2.21.2/vignettes/rstan.Rmd-426-per iteration. In this case, it is a non-issue because each chain has a r-cran-rstan-2.21.2/vignettes/rstan.Rmd:427:`treedepth__` of at most $7$ and the default is $10$. But if any `treedepth__` r-cran-rstan-2.21.2/vignettes/rstan.Rmd-428-were $11$, then it would be wise to increase the limit by passing ############################################## r-cran-rstan-2.21.2/vignettes/stanfit-objects.Rmd-132- r-cran-rstan-2.21.2/vignettes/stanfit-objects.Rmd:133:In `fit_summary$summary` all chains are merged whereas `fit_summary$c_summary` r-cran-rstan-2.21.2/vignettes/stanfit-objects.Rmd-134-contains summaries for each chain individually. Typically we want the ############################################## r-cran-rstan-2.21.2/R/stanc.R-114- if (any(!grepl("#include[[:space:]]+<", model_code))) r-cran-rstan-2.21.2/R/stanc.R:115: model_code <- gsub('#include (.*$)', '#include "\\1"', model_code) r-cran-rstan-2.21.2/R/stanc.R-116- unprocessed <- tempfile(fileext = ".stan") ############################################## r-cran-rstan-2.21.2/R/stanmodel-class.R-103- mod <- get("module", envir = object@dso@.CXXDSOMISC, inherits = FALSE) r-cran-rstan-2.21.2/R/stanmodel-class.R:104: eval(call("$", mod, paste('stan_fit4', model_cppname, sep = ''))) r-cran-rstan-2.21.2/R/stanmodel-class.R-105-} ############################################## r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-330- r-cran-rstan-2.21.2/inst/doc/rstan.Rmd:331:in which `N` can be $1$ as a special case. So if we know that `N` is always r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-332-larger than $1$, we can use a vector of length `N` in R as the data input for r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-333-`y` (for example, a vector created by `y <- rnorm(N)`). If we want to prevent r-cran-rstan-2.21.2/inst/doc/rstan.Rmd:334:RStan from treating the input data for `y` as a scalar when $N`$ is $1$, we r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-335-need to explicitly make it an array as the following R code shows: ############################################## r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-426-per iteration. In this case, it is a non-issue because each chain has a r-cran-rstan-2.21.2/inst/doc/rstan.Rmd:427:`treedepth__` of at most $7$ and the default is $10$. But if any `treedepth__` r-cran-rstan-2.21.2/inst/doc/rstan.Rmd-428-were $11$, then it would be wise to increase the limit by passing ############################################## r-cran-rstan-2.21.2/inst/doc/stanfit-objects.Rmd-132- r-cran-rstan-2.21.2/inst/doc/stanfit-objects.Rmd:133:In `fit_summary$summary` all chains are merged whereas `fit_summary$c_summary` r-cran-rstan-2.21.2/inst/doc/stanfit-objects.Rmd-134-contains summaries for each chain individually. Typically we want the ############################################## r-cran-rstan-2.21.2/debian/tests/run-unit-test-6-if [ "$AUTOPKGTEST_TMP" = "" ] ; then r-cran-rstan-2.21.2/debian/tests/run-unit-test:7: AUTOPKGTEST_TMP=`mktemp -d /tmp/${debname}-test.XXXXXX` r-cran-rstan-2.21.2/debian/tests/run-unit-test-8- trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM