===========================================================
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_________________ __ __ __| _/|__|/ |_
/ ___\_` __ \__ \ | | \/ __ | | \\_ __\
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grep rough audit - static analysis tool
v2.8 written by @Wireghoul
=================================[justanotherhacker.com]===
sortmerna-2.1/INSTALL-173-directory configuration variables that were expressed in terms of
sortmerna-2.1/INSTALL:174:`${prefix}'. Any directories that were specified during `configure',
sortmerna-2.1/INSTALL-175-but not in terms of `${prefix}', must each be overridden at install
##############################################
sortmerna-2.1/Makefile.in-44- { \
sortmerna-2.1/Makefile.in:45: flg=`printf '%s\n' "$$flg" | sed "s/$$1.*$$//"`; \
sortmerna-2.1/Makefile.in-46- }; \
##############################################
sortmerna-2.1/Makefile.in-181- esac
sortmerna-2.1/Makefile.in:182:am__vpath_adj_setup = srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`;
sortmerna-2.1/Makefile.in-183-am__vpath_adj = case $$p in \
sortmerna-2.1/Makefile.in:184: $(srcdir)/*) f=`echo "$$p" | sed "s|^$$srcdirstrip/||"`;; \
sortmerna-2.1/Makefile.in-185- *) f=$$p;; \
sortmerna-2.1/Makefile.in-186- esac;
sortmerna-2.1/Makefile.in:187:am__strip_dir = f=`echo $$p | sed -e 's|^.*/||'`;
sortmerna-2.1/Makefile.in-188-am__install_max = 40
sortmerna-2.1/Makefile.in-189-am__nobase_strip_setup = \
sortmerna-2.1/Makefile.in:190: srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*|]/\\\\&/g'`
sortmerna-2.1/Makefile.in-191-am__nobase_strip = \
##############################################
sortmerna-2.1/Makefile.in-628-.c.o:
sortmerna-2.1/Makefile.in:629:@am__fastdepCC_TRUE@ $(AM_V_CC)depbase=`echo $@ | sed 's|[^/]*$$|$(DEPDIR)/&|;s|\.o$$||'`;\
sortmerna-2.1/Makefile.in-630-@am__fastdepCC_TRUE@ $(COMPILE) -MT $@ -MD -MP -MF $$depbase.Tpo -c -o $@ $< &&\
##############################################
sortmerna-2.1/Makefile.in-636-.c.obj:
sortmerna-2.1/Makefile.in:637:@am__fastdepCC_TRUE@ $(AM_V_CC)depbase=`echo $@ | sed 's|[^/]*$$|$(DEPDIR)/&|;s|\.obj$$||'`;\
sortmerna-2.1/Makefile.in:638:@am__fastdepCC_TRUE@ $(COMPILE) -MT $@ -MD -MP -MF $$depbase.Tpo -c -o $@ `$(CYGPATH_W) '$<'` &&\
sortmerna-2.1/Makefile.in-639-@am__fastdepCC_TRUE@ $(am__mv) $$depbase.Tpo $$depbase.Po
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sortmerna-2.1/Makefile.in-641-@AMDEP_TRUE@@am__fastdepCC_FALSE@ DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
sortmerna-2.1/Makefile.in:642:@am__fastdepCC_FALSE@ $(AM_V_CC@am__nodep@)$(COMPILE) -c -o $@ `$(CYGPATH_W) '$<'`
sortmerna-2.1/Makefile.in-643-
sortmerna-2.1/Makefile.in-644-.cpp.o:
sortmerna-2.1/Makefile.in:645:@am__fastdepCXX_TRUE@ $(AM_V_CXX)depbase=`echo $@ | sed 's|[^/]*$$|$(DEPDIR)/&|;s|\.o$$||'`;\
sortmerna-2.1/Makefile.in-646-@am__fastdepCXX_TRUE@ $(CXXCOMPILE) -MT $@ -MD -MP -MF $$depbase.Tpo -c -o $@ $< &&\
##############################################
sortmerna-2.1/Makefile.in-652-.cpp.obj:
sortmerna-2.1/Makefile.in:653:@am__fastdepCXX_TRUE@ $(AM_V_CXX)depbase=`echo $@ | sed 's|[^/]*$$|$(DEPDIR)/&|;s|\.obj$$||'`;\
sortmerna-2.1/Makefile.in:654:@am__fastdepCXX_TRUE@ $(CXXCOMPILE) -MT $@ -MD -MP -MF $$depbase.Tpo -c -o $@ `$(CYGPATH_W) '$<'` &&\
sortmerna-2.1/Makefile.in-655-@am__fastdepCXX_TRUE@ $(am__mv) $$depbase.Tpo $$depbase.Po
##############################################
sortmerna-2.1/Makefile.in-657-@AMDEP_TRUE@@am__fastdepCXX_FALSE@ DEPDIR=$(DEPDIR) $(CXXDEPMODE) $(depcomp) @AMDEPBACKSLASH@
sortmerna-2.1/Makefile.in:658:@am__fastdepCXX_FALSE@ $(AM_V_CXX@am__nodep@)$(CXXCOMPILE) -c -o $@ `$(CYGPATH_W) '$<'`
sortmerna-2.1/Makefile.in-659-install-indexDATA: $(index_DATA)
##############################################
sortmerna-2.1/Makefile.in-677- @list='$(index_DATA)'; test -n "$(indexdir)" || list=; \
sortmerna-2.1/Makefile.in:678: files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
sortmerna-2.1/Makefile.in-679- dir='$(DESTDIR)$(indexdir)'; $(am__uninstall_files_from_dir)
##############################################
sortmerna-2.1/Makefile.in-698- @list='$(sortmerna_DATA)'; test -n "$(sortmernadir)" || list=; \
sortmerna-2.1/Makefile.in:699: files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
sortmerna-2.1/Makefile.in-700- dir='$(DESTDIR)$(sortmernadir)'; $(am__uninstall_files_from_dir)
##############################################
sortmerna-2.1/Makefile.in-719- @list='$(include_HEADERS)'; test -n "$(includedir)" || list=; \
sortmerna-2.1/Makefile.in:720: files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
sortmerna-2.1/Makefile.in-721- dir='$(DESTDIR)$(includedir)'; $(am__uninstall_files_from_dir)
##############################################
sortmerna-2.1/Makefile.in-752-GTAGS:
sortmerna-2.1/Makefile.in:753: here=`$(am__cd) $(top_builddir) && pwd` \
sortmerna-2.1/Makefile.in-754- && $(am__cd) $(top_srcdir) \
##############################################
sortmerna-2.1/Makefile.in-784- test -d "$(distdir)" || mkdir "$(distdir)"
sortmerna-2.1/Makefile.in:785: @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
sortmerna-2.1/Makefile.in:786: topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
sortmerna-2.1/Makefile.in-787- list='$(DISTFILES)'; \
##############################################
sortmerna-2.1/Makefile.in-798- if test -d $$d/$$file; then \
sortmerna-2.1/Makefile.in:799: dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
sortmerna-2.1/Makefile.in-800- if test -d "$(distdir)/$$file"; then \
##############################################
sortmerna-2.1/Makefile.in-884- test -d $(distdir)/_build || exit 0; \
sortmerna-2.1/Makefile.in:885: dc_install_base=`$(am__cd) $(distdir)/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \
sortmerna-2.1/Makefile.in-886- && dc_destdir="$${TMPDIR-/tmp}/am-dc-$$$$/" \
##############################################
sortmerna-2.1/Makefile.in-928- }; \
sortmerna-2.1/Makefile.in:929: test `$(am__distuninstallcheck_listfiles) | wc -l` -eq 0 \
sortmerna-2.1/Makefile.in-930- || { echo "ERROR: files left after uninstall:" ; \
##############################################
sortmerna-2.1/Makefile.in-940- fi
sortmerna-2.1/Makefile.in:941: @test `$(distcleancheck_listfiles) | wc -l` -eq 0 \
sortmerna-2.1/Makefile.in-942- || { echo "ERROR: files left in build directory after distclean:" ; \
##############################################
sortmerna-2.1/aclocal.m4-92-# iff we strip the leading $srcdir from $ac_aux_dir. That would be:
sortmerna-2.1/aclocal.m4:93:# am_aux_dir='\$(top_srcdir)/'`expr "$ac_aux_dir" : "$srcdir//*\(.*\)"`
sortmerna-2.1/aclocal.m4-94-# and then we would define $MISSING as
##############################################
sortmerna-2.1/aclocal.m4-108-# expand $ac_aux_dir to an absolute path
sortmerna-2.1/aclocal.m4:109:am_aux_dir=`cd $ac_aux_dir && pwd`
sortmerna-2.1/aclocal.m4-110-])
##############################################
sortmerna-2.1/aclocal.m4-206- if test "$am_compiler_list" = ""; then
sortmerna-2.1/aclocal.m4:207: am_compiler_list=`sed -n ['s/^#*\([a-zA-Z0-9]*\))$/\1/p'] < ./depcomp`
sortmerna-2.1/aclocal.m4-208- fi
##############################################
sortmerna-2.1/aclocal.m4-357- # Strip MF so we end up with the name of the file.
sortmerna-2.1/aclocal.m4:358: mf=`echo "$mf" | sed -e 's/:.*$//'`
sortmerna-2.1/aclocal.m4-359- # Check whether this is an Automake generated Makefile or not.
##############################################
sortmerna-2.1/aclocal.m4-366- if sed -n 's,^#.*generated by automake.*,X,p' "$mf" | grep X >/dev/null 2>&1; then
sortmerna-2.1/aclocal.m4:367: dirpart=`AS_DIRNAME("$mf")`
sortmerna-2.1/aclocal.m4-368- else
##############################################
sortmerna-2.1/aclocal.m4-372- # from the Makefile without running 'make'.
sortmerna-2.1/aclocal.m4:373: DEPDIR=`sed -n 's/^DEPDIR = //p' < "$mf"`
sortmerna-2.1/aclocal.m4-374- test -z "$DEPDIR" && continue
sortmerna-2.1/aclocal.m4:375: am__include=`sed -n 's/^am__include = //p' < "$mf"`
sortmerna-2.1/aclocal.m4-376- test -z "$am__include" && continue
sortmerna-2.1/aclocal.m4:377: am__quote=`sed -n 's/^am__quote = //p' < "$mf"`
sortmerna-2.1/aclocal.m4-378- # Find all dependency output files, they are included files with
##############################################
sortmerna-2.1/aclocal.m4-386- test -f "$dirpart/$file" && continue
sortmerna-2.1/aclocal.m4:387: fdir=`AS_DIRNAME(["$file"])`
sortmerna-2.1/aclocal.m4-388- AS_MKDIR_P([$dirpart/$fdir])
##############################################
sortmerna-2.1/aclocal.m4-444-AC_REQUIRE([AC_PROG_INSTALL])dnl
sortmerna-2.1/aclocal.m4:445:if test "`cd $srcdir && pwd`" != "`pwd`"; then
sortmerna-2.1/aclocal.m4-446- # Use -I$(srcdir) only when $(srcdir) != ., so that make's output
##############################################
sortmerna-2.1/aclocal.m4-599- * )
sortmerna-2.1/aclocal.m4:600: _am_stamp_count=`expr $_am_stamp_count + 1` ;;
sortmerna-2.1/aclocal.m4-601- esac
sortmerna-2.1/aclocal.m4-602-done
sortmerna-2.1/aclocal.m4:603:echo "timestamp for $_am_arg" >`AS_DIRNAME(["$_am_arg"])`/stamp-h[]$_am_stamp_count])
sortmerna-2.1/aclocal.m4-604-
##############################################
sortmerna-2.1/aclocal.m4-670-# Ignore all kinds of additional output from 'make'.
sortmerna-2.1/aclocal.m4:671:case `$am_make -s -f confmf 2> /dev/null` in #(
sortmerna-2.1/aclocal.m4-672-*the\ am__doit\ target*)
##############################################
sortmerna-2.1/aclocal.m4-680- echo '.include "confinc"' > confmf
sortmerna-2.1/aclocal.m4:681: case `$am_make -s -f confmf 2> /dev/null` in #(
sortmerna-2.1/aclocal.m4-682- *the\ am__doit\ target*)
##############################################
sortmerna-2.1/aclocal.m4-862- echo "timestamp, slept: $am_has_slept" > conftest.file
sortmerna-2.1/aclocal.m4:863: set X `ls -Lt "$srcdir/configure" conftest.file 2> /dev/null`
sortmerna-2.1/aclocal.m4-864- if test "$[*]" = "X"; then
sortmerna-2.1/aclocal.m4-865- # -L didn't work.
sortmerna-2.1/aclocal.m4:866: set X `ls -t "$srcdir/configure" conftest.file`
sortmerna-2.1/aclocal.m4-867- fi
##############################################
sortmerna-2.1/compile-67- mingw/*)
sortmerna-2.1/compile:68: file=`cmd //C echo "$file " | sed -e 's/"\(.*\) " *$/\1/'`
sortmerna-2.1/compile-69- ;;
sortmerna-2.1/compile-70- cygwin/*)
sortmerna-2.1/compile:71: file=`cygpath -m "$file" || echo "$file"`
sortmerna-2.1/compile-72- ;;
sortmerna-2.1/compile-73- wine/*)
sortmerna-2.1/compile:74: file=`winepath -w "$file" || echo "$file"`
sortmerna-2.1/compile-75- ;;
##############################################
sortmerna-2.1/compile-309-# Name of file we expect compiler to create.
sortmerna-2.1/compile:310:cofile=`echo "$cfile" | sed 's|^.*[\\/]||; s|^[a-zA-Z]:||; s/\.c$/.o/'`
sortmerna-2.1/compile-311-
##############################################
sortmerna-2.1/compile-315-# object file name, since that is what matters with a parallel build.
sortmerna-2.1/compile:316:lockdir=`echo "$cofile" | sed -e 's|[/\\:.-]|_|g'`.d
sortmerna-2.1/compile-317-while true; do
##############################################
sortmerna-2.1/configure-45-if test -z "$BASH_VERSION$ZSH_VERSION" \
sortmerna-2.1/configure:46: && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
sortmerna-2.1/configure-47- as_echo='print -r --'
sortmerna-2.1/configure-48- as_echo_n='print -rn --'
sortmerna-2.1/configure:49:elif (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
sortmerna-2.1/configure-50- as_echo='printf %s\n'
##############################################
sortmerna-2.1/configure-52-else
sortmerna-2.1/configure:53: if test "X`(/usr/ucb/echo -n -n $as_echo) 2>/dev/null`" = "X-n $as_echo"; then
sortmerna-2.1/configure-54- as_echo_body='eval /usr/ucb/echo -n "$1$as_nl"'
##############################################
sortmerna-2.1/configure-62- expr "X$arg" : "X\\(.*\\)$as_nl";
sortmerna-2.1/configure:63: arg=`expr "X$arg" : ".*$as_nl\\(.*\\)"`;;
sortmerna-2.1/configure-64- esac;
##############################################
sortmerna-2.1/configure-199- eval 'test \"x\$as_lineno_1'\$as_run'\" != \"x\$as_lineno_2'\$as_run'\" &&
sortmerna-2.1/configure:200: test \"x\`expr \$as_lineno_1'\$as_run' + 1\`\" = \"x\$as_lineno_2'\$as_run'\"' || exit 1
sortmerna-2.1/configure-201-test \$(( 1 + 1 )) = 2 || exit 1"
##############################################
sortmerna-2.1/configure-327- case $as_dir in #(
sortmerna-2.1/configure:328: *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
sortmerna-2.1/configure-329- *) as_qdir=$as_dir;;
##############################################
sortmerna-2.1/configure-400- {
sortmerna-2.1/configure:401: as_val=`expr "$@" || test $? -eq 1`
sortmerna-2.1/configure-402- }
##############################################
sortmerna-2.1/configure-407-# ----------------------------------------
sortmerna-2.1/configure:408:# Output "`basename $0`: error: ERROR" to stderr. If LINENO and LOG_FD are
sortmerna-2.1/configure-409-# provided, also output the error to LOG_FD, referencing LINENO. Then exit the
##############################################
sortmerna-2.1/configure-470- eval 'test "x$as_lineno_1'$as_run'" != "x$as_lineno_2'$as_run'" &&
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sortmerna-2.1/configure-472- # Blame Lee E. McMahon (1931-1989) for sed's syntax. :-)
##############################################
sortmerna-2.1/configure-803- case $ac_option in
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sortmerna-2.1/configure-805- *=) ac_optarg= ;;
##############################################
sortmerna-2.1/configure-847- -disable-* | --disable-*)
sortmerna-2.1/configure:848: ac_useropt=`expr "x$ac_option" : 'x-*disable-\(.*\)'`
sortmerna-2.1/configure-849- # Reject names that are not valid shell variable names.
##############################################
sortmerna-2.1/configure-852- ac_useropt_orig=$ac_useropt
sortmerna-2.1/configure:853: ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
sortmerna-2.1/configure-854- case $ac_user_opts in
##############################################
sortmerna-2.1/configure-873- -enable-* | --enable-*)
sortmerna-2.1/configure:874: ac_useropt=`expr "x$ac_option" : 'x-*enable-\([^=]*\)'`
sortmerna-2.1/configure-875- # Reject names that are not valid shell variable names.
##############################################
sortmerna-2.1/configure-878- ac_useropt_orig=$ac_useropt
sortmerna-2.1/configure:879: ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
sortmerna-2.1/configure-880- case $ac_user_opts in
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sortmerna-2.1/configure-1077- -with-* | --with-*)
sortmerna-2.1/configure:1078: ac_useropt=`expr "x$ac_option" : 'x-*with-\([^=]*\)'`
sortmerna-2.1/configure-1079- # Reject names that are not valid shell variable names.
##############################################
sortmerna-2.1/configure-1082- ac_useropt_orig=$ac_useropt
sortmerna-2.1/configure:1083: ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
sortmerna-2.1/configure-1084- case $ac_user_opts in
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sortmerna-2.1/configure-1093- -without-* | --without-*)
sortmerna-2.1/configure:1094: ac_useropt=`expr "x$ac_option" : 'x-*without-\(.*\)'`
sortmerna-2.1/configure-1095- # Reject names that are not valid shell variable names.
##############################################
sortmerna-2.1/configure-1098- ac_useropt_orig=$ac_useropt
sortmerna-2.1/configure:1099: ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
sortmerna-2.1/configure-1100- case $ac_user_opts in
##############################################
sortmerna-2.1/configure-1131- *=*)
sortmerna-2.1/configure:1132: ac_envvar=`expr "x$ac_option" : 'x\([^=]*\)='`
sortmerna-2.1/configure-1133- # Reject names that are not valid shell variable names.
##############################################
sortmerna-2.1/configure-1152-if test -n "$ac_prev"; then
sortmerna-2.1/configure:1153: ac_option=--`echo $ac_prev | sed 's/_/-/g'`
sortmerna-2.1/configure-1154- as_fn_error $? "missing argument to $ac_option"
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sortmerna-2.1/configure-1174- */ )
sortmerna-2.1/configure:1175: ac_val=`expr "X$ac_val" : 'X\(.*[^/]\)' \| "X$ac_val" : 'X\(.*\)'`
sortmerna-2.1/configure-1176- eval $ac_var=\$ac_val;;
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sortmerna-2.1/configure-1209-ac_ls_di=`ls -di .` &&
sortmerna-2.1/configure:1210:ac_pwd_ls_di=`cd "$ac_pwd" && ls -di .` ||
sortmerna-2.1/configure-1211- as_fn_error $? "working directory cannot be determined"
##############################################
sortmerna-2.1/configure-1265-case $srcdir in
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sortmerna-2.1/configure-1267-esac
##############################################
sortmerna-2.1/configure-1308-By default, \`make install' will install all the files in
sortmerna-2.1/configure:1309:\`$ac_default_prefix/bin', \`$ac_default_prefix/lib' etc. You can specify
sortmerna-2.1/configure:1310:an installation prefix other than \`$ac_default_prefix' using \`--prefix',
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##############################################
sortmerna-2.1/configure-1395-*)
sortmerna-2.1/configure:1396: ac_dir_suffix=/`$as_echo "$ac_dir" | sed 's|^\.[\\/]||'`
sortmerna-2.1/configure-1397- # A ".." for each directory in $ac_dir_suffix.
sortmerna-2.1/configure:1398: ac_top_builddir_sub=`$as_echo "$ac_dir_suffix" | sed 's|/[^\\/]*|/..|g;s|/||'`
sortmerna-2.1/configure-1399- case $ac_top_builddir_sub in
##############################################
sortmerna-2.1/configure-1938- *\'*)
sortmerna-2.1/configure:1939: ac_arg=`$as_echo "$ac_arg" | sed "s/'/'\\\\\\\\''/g"` ;;
sortmerna-2.1/configure-1940- esac
##############################################
sortmerna-2.1/configure-2021- case $ac_val in
sortmerna-2.1/configure:2022: *\'\''*) ac_val=`$as_echo "$ac_val" | sed "s/'\''/'\''\\\\\\\\'\'''\''/g"`;;
sortmerna-2.1/configure-2023- esac
##############################################
sortmerna-2.1/configure-2036- case $ac_val in
sortmerna-2.1/configure:2037: *\'\''*) ac_val=`$as_echo "$ac_val" | sed "s/'\''/'\''\\\\\\\\'\'''\''/g"`;;
sortmerna-2.1/configure-2038- esac
##############################################
sortmerna-2.1/configure-2159- set,)
sortmerna-2.1/configure:2160: { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&5
sortmerna-2.1/configure:2161:$as_echo "$as_me: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&2;}
sortmerna-2.1/configure-2162- ac_cache_corrupted=: ;;
##############################################
sortmerna-2.1/configure-2170- # differences in whitespace do not lead to failure.
sortmerna-2.1/configure:2171: ac_old_val_w=`echo x $ac_old_val`
sortmerna-2.1/configure:2172: ac_new_val_w=`echo x $ac_new_val`
sortmerna-2.1/configure-2173- if test "$ac_old_val_w" != "$ac_new_val_w"; then
##############################################
sortmerna-2.1/configure-2190- case $ac_new_val in
sortmerna-2.1/configure:2191: *\'*) ac_arg=$ac_var=`$as_echo "$ac_new_val" | sed "s/'/'\\\\\\\\''/g"` ;;
sortmerna-2.1/configure-2192- *) ac_arg=$ac_var=$ac_new_val ;;
##############################################
sortmerna-2.1/configure-2368- echo "timestamp, slept: $am_has_slept" > conftest.file
sortmerna-2.1/configure:2369: set X `ls -Lt "$srcdir/configure" conftest.file 2> /dev/null`
sortmerna-2.1/configure-2370- if test "$*" = "X"; then
sortmerna-2.1/configure-2371- # -L didn't work.
sortmerna-2.1/configure:2372: set X `ls -t "$srcdir/configure" conftest.file`
sortmerna-2.1/configure-2373- fi
##############################################
sortmerna-2.1/configure-2419-ac_script='s/[\\$]/&&/g;s/;s,x,x,$//'
sortmerna-2.1/configure:2420:program_transform_name=`$as_echo "$program_transform_name" | sed "$ac_script"`
sortmerna-2.1/configure-2421-
sortmerna-2.1/configure-2422-# expand $ac_aux_dir to an absolute path
sortmerna-2.1/configure:2423:am_aux_dir=`cd $ac_aux_dir && pwd`
sortmerna-2.1/configure-2424-
##############################################
sortmerna-2.1/configure-2564- as_fn_executable_p "$as_dir/$ac_prog$ac_exec_ext" || continue
sortmerna-2.1/configure:2565: case `"$as_dir/$ac_prog$ac_exec_ext" --version 2>&1` in #(
sortmerna-2.1/configure-2566- 'mkdir (GNU coreutils) '* | \
##############################################
sortmerna-2.1/configure-2637-set x ${MAKE-make}
sortmerna-2.1/configure:2638:ac_make=`$as_echo "$2" | sed 's/+/p/g; s/[^a-zA-Z0-9_]/_/g'`
sortmerna-2.1/configure-2639-if eval \${ac_cv_prog_make_${ac_make}_set+:} false; then :
##############################################
sortmerna-2.1/configure-2647-# GNU make sometimes prints "make[1]: Entering ...", which would confuse us.
sortmerna-2.1/configure:2648:case `${MAKE-make} -f conftest.make 2>/dev/null` in
sortmerna-2.1/configure-2649- *@@@%%%=?*=@@@%%%*)
##############################################
sortmerna-2.1/configure-2713-
sortmerna-2.1/configure:2714:if test "`cd $srcdir && pwd`" != "`pwd`"; then
sortmerna-2.1/configure-2715- # Use -I$(srcdir) only when $(srcdir) != ., so that make's output
##############################################
sortmerna-2.1/configure-2988-$as_echo_n "checking whether the C++ compiler works... " >&6; }
sortmerna-2.1/configure:2989:ac_link_default=`$as_echo "$ac_link" | sed 's/ -o *conftest[^ ]*//'`
sortmerna-2.1/configure-2990-
##############################################
sortmerna-2.1/configure-3032- then :; else
sortmerna-2.1/configure:3033: ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
sortmerna-2.1/configure-3034- fi
##############################################
sortmerna-2.1/configure-3092- *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM | *.o | *.obj ) ;;
sortmerna-2.1/configure:3093: *.* ) ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
sortmerna-2.1/configure-3094- break;;
##############################################
sortmerna-2.1/configure-3201- *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM ) ;;
sortmerna-2.1/configure:3202: *) ac_cv_objext=`expr "$ac_file" : '.*\.\(.*\)'`
sortmerna-2.1/configure-3203- break;;
##############################################
sortmerna-2.1/configure-3360-# Ignore all kinds of additional output from 'make'.
sortmerna-2.1/configure:3361:case `$am_make -s -f confmf 2> /dev/null` in #(
sortmerna-2.1/configure-3362-*the\ am__doit\ target*)
##############################################
sortmerna-2.1/configure-3370- echo '.include "confinc"' > confmf
sortmerna-2.1/configure:3371: case `$am_make -s -f confmf 2> /dev/null` in #(
sortmerna-2.1/configure-3372- *the\ am__doit\ target*)
##############################################
sortmerna-2.1/configure-3433- if test "$am_compiler_list" = ""; then
sortmerna-2.1/configure:3434: am_compiler_list=`sed -n 's/^#*\([a-zA-Z0-9]*\))$/\1/p' < ./depcomp`
sortmerna-2.1/configure-3435- fi
##############################################
sortmerna-2.1/configure-4159- if test "$am_compiler_list" = ""; then
sortmerna-2.1/configure:4160: am_compiler_list=`sed -n 's/^#*\([a-zA-Z0-9]*\))$/\1/p' < ./depcomp`
sortmerna-2.1/configure-4161- fi
##############################################
sortmerna-2.1/configure-4482- # Check for GNU $ac_path_GREP
sortmerna-2.1/configure:4483:case `"$ac_path_GREP" --version 2>&1` in
sortmerna-2.1/configure-4484-*GNU*)
##############################################
sortmerna-2.1/configure-4548- # Check for GNU $ac_path_EGREP
sortmerna-2.1/configure:4549:case `"$ac_path_EGREP" --version 2>&1` in
sortmerna-2.1/configure-4550-*GNU*)
##############################################
sortmerna-2.1/configure-4709-do :
sortmerna-2.1/configure:4710: as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh`
sortmerna-2.1/configure-4711-ac_fn_c_check_header_compile "$LINENO" "$ac_header" "$as_ac_Header" "$ac_includes_default
##############################################
sortmerna-2.1/configure-4714- cat >>confdefs.h <<_ACEOF
sortmerna-2.1/configure:4715:#define `$as_echo "HAVE_$ac_header" | $as_tr_cpp` 1
sortmerna-2.1/configure-4716-_ACEOF
##############################################
sortmerna-2.1/configure-4788-do :
sortmerna-2.1/configure:4789: as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh`
sortmerna-2.1/configure-4790-ac_fn_c_check_header_compile "$LINENO" "$ac_header" "$as_ac_Header" "$ac_includes_default
##############################################
sortmerna-2.1/configure-4793- cat >>confdefs.h <<_ACEOF
sortmerna-2.1/configure:4794:#define `$as_echo "HAVE_$ac_header" | $as_tr_cpp` 1
sortmerna-2.1/configure-4795-_ACEOF
##############################################
sortmerna-2.1/configure-5091- ac_script='s/\$U\././;s/\.o$//;s/\.obj$//'
sortmerna-2.1/configure:5092: ac_i=`$as_echo "$ac_i" | sed "$ac_script"`
sortmerna-2.1/configure-5093- # 2. Prepend LIBOBJDIR. When used with automake>=1.10 LIBOBJDIR
##############################################
sortmerna-2.1/configure-5186-if test -z "$BASH_VERSION$ZSH_VERSION" \
sortmerna-2.1/configure:5187: && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
sortmerna-2.1/configure-5188- as_echo='print -r --'
sortmerna-2.1/configure-5189- as_echo_n='print -rn --'
sortmerna-2.1/configure:5190:elif (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
sortmerna-2.1/configure-5191- as_echo='printf %s\n'
##############################################
sortmerna-2.1/configure-5193-else
sortmerna-2.1/configure:5194: if test "X`(/usr/ucb/echo -n -n $as_echo) 2>/dev/null`" = "X-n $as_echo"; then
sortmerna-2.1/configure-5195- as_echo_body='eval /usr/ucb/echo -n "$1$as_nl"'
##############################################
sortmerna-2.1/configure-5203- expr "X$arg" : "X\\(.*\\)$as_nl";
sortmerna-2.1/configure:5204: arg=`expr "X$arg" : ".*$as_nl\\(.*\\)"`;;
sortmerna-2.1/configure-5205- esac;
##############################################
sortmerna-2.1/configure-5280-# ----------------------------------------
sortmerna-2.1/configure:5281:# Output "`basename $0`: error: ERROR" to stderr. If LINENO and LOG_FD are
sortmerna-2.1/configure-5282-# provided, also output the error to LOG_FD, referencing LINENO. Then exit the
##############################################
sortmerna-2.1/configure-5352- {
sortmerna-2.1/configure:5353: as_val=`expr "$@" || test $? -eq 1`
sortmerna-2.1/configure-5354- }
##############################################
sortmerna-2.1/configure-5456- case $as_dir in #(
sortmerna-2.1/configure:5457: *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
sortmerna-2.1/configure-5458- *) as_qdir=$as_dir;;
##############################################
sortmerna-2.1/configure-5592-cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
sortmerna-2.1/configure:5593:ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
sortmerna-2.1/configure-5594-ac_cs_version="\\
##############################################
sortmerna-2.1/configure-5617- --*=?*)
sortmerna-2.1/configure:5618: ac_option=`expr "X$1" : 'X\([^=]*\)='`
sortmerna-2.1/configure:5619: ac_optarg=`expr "X$1" : 'X[^=]*=\(.*\)'`
sortmerna-2.1/configure-5620- ac_shift=:
##############################################
sortmerna-2.1/configure-5622- --*=)
sortmerna-2.1/configure:5623: ac_option=`expr "X$1" : 'X\([^=]*\)='`
sortmerna-2.1/configure-5624- ac_optarg=
##############################################
sortmerna-2.1/configure-5646- case $ac_optarg in
sortmerna-2.1/configure:5647: *\'*) ac_optarg=`$as_echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"` ;;
sortmerna-2.1/configure-5648- '') as_fn_error $? "missing file argument" ;;
##############################################
sortmerna-2.1/configure-5654- case $ac_optarg in
sortmerna-2.1/configure:5655: *\'*) ac_optarg=`$as_echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"` ;;
sortmerna-2.1/configure-5656- esac
##############################################
sortmerna-2.1/configure-5782-fi
sortmerna-2.1/configure:5783:ac_cs_awk_cr=`$AWK 'BEGIN { print "a\rb" }' </dev/null 2>/dev/null`
sortmerna-2.1/configure-5784-if test "$ac_cs_awk_cr" = "a${ac_cr}b"; then
##############################################
sortmerna-2.1/configure-5799- as_fn_error $? "could not make $CONFIG_STATUS" "$LINENO" 5
sortmerna-2.1/configure:5800:ac_delim_num=`echo "$ac_subst_vars" | grep -c '^'`
sortmerna-2.1/configure-5801-ac_delim='%!_!# '
##############################################
sortmerna-2.1/configure-5805-
sortmerna-2.1/configure:5806: ac_delim_n=`sed -n "s/.*$ac_delim\$/X/p" conf$$subs.awk | grep -c X`
sortmerna-2.1/configure-5807- if test $ac_delim_n = $ac_delim_num; then
##############################################
sortmerna-2.1/configure-5943-for ac_last_try in false false :; do
sortmerna-2.1/configure:5944: ac_tt=`sed -n "/$ac_delim/p" confdefs.h`
sortmerna-2.1/configure-5945- if test -z "$ac_tt"; then
##############################################
sortmerna-2.1/configure-6075- esac
sortmerna-2.1/configure:6076: case $ac_f in *\'*) ac_f=`$as_echo "$ac_f" | sed "s/'/'\\\\\\\\''/g"`;; esac
sortmerna-2.1/configure-6077- as_fn_append ac_file_inputs " '$ac_f'"
##############################################
sortmerna-2.1/configure-6134-*)
sortmerna-2.1/configure:6135: ac_dir_suffix=/`$as_echo "$ac_dir" | sed 's|^\.[\\/]||'`
sortmerna-2.1/configure-6136- # A ".." for each directory in $ac_dir_suffix.
sortmerna-2.1/configure:6137: ac_top_builddir_sub=`$as_echo "$ac_dir_suffix" | sed 's|/[^\\/]*|/..|g;s|/||'`
sortmerna-2.1/configure-6138- case $ac_top_builddir_sub in
##############################################
sortmerna-2.1/configure-6195-/@mandir@/p'
sortmerna-2.1/configure:6196:case `eval "sed -n \"\$ac_sed_dataroot\" $ac_file_inputs"` in
sortmerna-2.1/configure-6197-*datarootdir*) ac_datarootdir_seen=yes;;
##############################################
sortmerna-2.1/configure-6212-
sortmerna-2.1/configure:6213:# Neutralize VPATH when `$srcdir' = `.'.
sortmerna-2.1/configure-6214-# Shell code in configure.ac might set extrasub.
##############################################
sortmerna-2.1/configure-6240-test -z "$ac_datarootdir_hack$ac_datarootdir_seen" &&
sortmerna-2.1/configure:6241: { ac_out=`sed -n '/\${datarootdir}/p' "$ac_tmp/out"`; test -n "$ac_out"; } &&
sortmerna-2.1/configure-6242- { ac_out=`sed -n '/^[ ]*datarootdir[ ]*:*=/p' \
##############################################
sortmerna-2.1/configure-6286- * )
sortmerna-2.1/configure:6287: _am_stamp_count=`expr $_am_stamp_count + 1` ;;
sortmerna-2.1/configure-6288- esac
##############################################
sortmerna-2.1/configure-6333- # Strip MF so we end up with the name of the file.
sortmerna-2.1/configure:6334: mf=`echo "$mf" | sed -e 's/:.*$//'`
sortmerna-2.1/configure-6335- # Check whether this is an Automake generated Makefile or not.
##############################################
sortmerna-2.1/configure-6370- # from the Makefile without running 'make'.
sortmerna-2.1/configure:6371: DEPDIR=`sed -n 's/^DEPDIR = //p' < "$mf"`
sortmerna-2.1/configure-6372- test -z "$DEPDIR" && continue
sortmerna-2.1/configure:6373: am__include=`sed -n 's/^am__include = //p' < "$mf"`
sortmerna-2.1/configure-6374- test -z "$am__include" && continue
sortmerna-2.1/configure:6375: am__quote=`sed -n 's/^am__quote = //p' < "$mf"`
sortmerna-2.1/configure-6376- # Find all dependency output files, they are included files with
##############################################
sortmerna-2.1/depcomp-64- case $1 in
sortmerna-2.1/depcomp:65: */*) dir=`echo "$1" | sed -e 's|/[^/]*$|/|'`;;
sortmerna-2.1/depcomp-66- *) dir=;;
##############################################
sortmerna-2.1/depcomp-73-{
sortmerna-2.1/depcomp:74: base=`echo "$1" | sed -e 's|^.*/||' -e 's/\.[^.]*$//'`
sortmerna-2.1/depcomp-75-}
##############################################
sortmerna-2.1/depcomp-126- sed 's|[^\\/]*$|'${DEPDIR-.deps}'/&|;s|\.\([^.]*\)$|.P\1|;s|Pobj$|Po|'`}
sortmerna-2.1/depcomp:127:tmpdepfile=${tmpdepfile-`echo "$depfile" | sed 's/\.\([^.]*\)$/.T\1/'`}
sortmerna-2.1/depcomp-128-
##############################################
sortmerna-2.1/depcomp-405- sleep 1
sortmerna-2.1/depcomp:406: i=`expr $i - 1`
sortmerna-2.1/depcomp-407- done
sortmerna-2.1/depcomp-408- fi
sortmerna-2.1/depcomp:409: i=`expr $i - 1`
sortmerna-2.1/depcomp-410- done
##############################################
sortmerna-2.1/depcomp-425- # Do two passes, one to just change these to
sortmerna-2.1/depcomp:426: # `$object: dependent.h' and one to simply `dependent.h:'.
sortmerna-2.1/depcomp-427- sed "s,^[^:]*:,$object :," < "$tmpdepfile" > "$depfile"
##############################################
sortmerna-2.1/depcomp-659- done
sortmerna-2.1/depcomp:660: obj_suffix=`echo "$object" | sed 's/^.*\././'`
sortmerna-2.1/depcomp-661- touch "$tmpdepfile"
##############################################
sortmerna-2.1/install-sh-229- fi
sortmerna-2.1/install-sh:230: cp_umask=`expr '(' 777 - $mode % 1000 ')' $u_plus_rw`;;
sortmerna-2.1/install-sh-231- *)
##############################################
sortmerna-2.1/install-sh-276- dstdir=$dst
sortmerna-2.1/install-sh:277: dst=$dstdir/`basename "$src"`
sortmerna-2.1/install-sh-278- dstdir_status=0
##############################################
sortmerna-2.1/install-sh-358- # FreeBSD 6.1 mkdir -m -p sets mode of existing directory.
sortmerna-2.1/install-sh:359: ls_ld_tmpdir=`ls -ld "$tmpdir"`
sortmerna-2.1/install-sh-360- case $ls_ld_tmpdir in
##############################################
sortmerna-2.1/install-sh-365- $mkdirprog -m$different_mode -p -- "$tmpdir" && {
sortmerna-2.1/install-sh:366: ls_ld_tmpdir_1=`ls -ld "$tmpdir"`
sortmerna-2.1/install-sh-367- test "$ls_ld_tmpdir" = "$ls_ld_tmpdir_1"
##############################################
sortmerna-2.1/install-sh-425- case $prefix in
sortmerna-2.1/install-sh:426: *\'*) qprefix=`echo "$prefix" | sed "s/'/'\\\\\\\\''/g"`;;
sortmerna-2.1/install-sh-427- *) qprefix=$prefix;;
##############################################
sortmerna-2.1/install-sh-474- if $copy_on_change &&
sortmerna-2.1/install-sh:475: old=`LC_ALL=C ls -dlL "$dst" 2>/dev/null` &&
sortmerna-2.1/install-sh:476: new=`LC_ALL=C ls -dlL "$dsttmp" 2>/dev/null` &&
sortmerna-2.1/install-sh-477-
##############################################
sortmerna-2.1/rRNA_databases/silva-bac-16s-id90.fasta-196-ttttataagagtttgatcctggctcaggatgaacgctggctgtgtgcctaatacatgcatgtcgagcgaggttagcaataacctagcggcgaatgggtgagtaacacgtgcttaatctaccttttagattggaatacccattggaaacaatggctaatgccggatacgcatggaaccgcatggttccgttgtgaaaggcgctgtaaggcgccactaaaagatgagggtgcggaacattagttagttggtgaggtaatggcccaccaagactatgatgtttagccgggtcgagagactgaacggccacattgggactgagatacggcccaaactcctacgggaggcagcagtagggaatattccacaatgagcgaaagcttgatggagcgacacagcgtgcacgatgaaggtcttcggattgtaaagtgctgttataagggaagaacatttgcaataggaaatgattgcagactgacggtaccttgtcagaaagcgatggctaactatgtgccagcagccgcggtaatacataggtcgcaagcgttatccggaattattgggcgtaaagcgttcgtaggctgtttgttaagtctggagttaaatcccggggctcaaccccggctcgctttggatactagcaaactagagttagatagaggtaagcggaattccatgtgaagcggtgaaatgcgtagatatatggaagaacaccaaaggcgaaggcagcttactgggtctatactgacgctgagggacgaaagcgtggggagcaaacaggattagataccctggtagtccacgccgtaaacgatgatcattagtcggtggagaatcactgacgcagctaacgcattaaatgatccgcctgagtagtatgctcgcaagagtgaaacttaaaggaattgacggggacccgcacaagcggtggagcatgtggtttaatttgaagatacacggaaaaccttacccactcttgacatccttcgcaaagctatagagatatagtggaggttatcggagtgacagatggtgcatggttgtcgtcagctcgtgtcgtgagatgtttggtcaagtcctgcaacgagcgcaacccctatctttagttactaacattaagttgaggactctagagatactgcctgggtaactgggaggaaggtggggatgacgtcaaatcatcatgcctcttacgagtggggccacacacgtgctacaatggtcggtacaaagagaagcaatatggcgacatggagcaaatctcaaaaagccgatctcagttcggattggagtctgcaattcgactccatgaagtcggaatcgctagtaatcgcagatcagctatgctgcggtgaatacgttctcgggtcttgtacacaccgcccgtcacaccatgggagctggtaatacccaaagtcggtttgctaacctcggaggcgaccgcctaaggtaggactggtgactggggtgaagtcgtaacaaggtatccctacgagaacgtggggatggatcacctccttt
sortmerna-2.1/rRNA_databases/silva-bac-16s-id90.fasta:197:>UniPlasm count=1; cluster_weight=127; cluster=UniPlasm; cluster_score=1.000000; cluster_center=True;
sortmerna-2.1/rRNA_databases/silva-bac-16s-id90.fasta-198-aaaatgagagtttgatcctggctcaggataaacgctggcggcatgcctaatacatgcaagtcgaacggaggtgcttgcacctcagtggcgaacgggtgagtaacacgtatctaacctacctcatagcgggggataacttttggaaacgaaagataataccgcatgtagatcttattatcgcatgagaaaagatcaaaagaaccgtttggttcactatgagatggggatgcggcgtattagctagtaggtgagataatagcccacctaggcgatgatacgtagccgaactgagaggttgatcggccacattgggactgagatacggcccagactcctacgggaggcagcagtagggaatttttcacaatggacgaaagtctgatgaagcaatgccgcgtgagtgatgacggccttcgggttgtaaagctctgttgtaagggaagaaaaaataaagtaggaaatgactttatcttgacagtaccttaccagaaagccacggctaactatgtgccagcagccgcggtaatacataggtggcaagcgttatccggatttattgggcgtatagggtgcgtaggcggttttgcaagtttgaggttaaagtccggagctcaactccggttcgccttgaaaactgtattactagaatgcaagagaggtaagcggaattccatgtgtagcggtgaaatgcgtagatatatggaagaacacctgtggcgaaagcggcttactggcttgttattgacgctgaggcacgaaagcgtggggagcaaataggattagataccctagtagtccacgccgtaaacgatgagtactaagtgttgggataactcagcgctgcagctaacgcattaagtactccgcctgagtagtatgctcgcaagagtgaaactcaaaggaattgacggggacccgcacaagtggtggagcatgtggtttaattcgaagcaacacgaagaaccttaccagggcttgacatccagtgcaaagctatagagatatagtagaggttaacattgagacaggtggtgcatggttgtcgtcagttcgtgccgtgaggtgttgggttaagtcccgcaacgaacgcaacccttgtcgttagttactaacattaagttgagaactctaacgagactgctagtgtaagctagaggaaggtggggatgacgtcaaatcatcatgccccttatgtcctgggctacacacgtgctacaatggctggtacaaagagttgcaatcctgtgaaggggagctaatctcaaaaaaccagtctcagttcggattgaagtctgcaactcgacttcatgaagccggaatcactagtaatcgcgaatcagctatgtcgcggtgaatacgttctcgggtcttgtacacaccgcccgtcacaccatgagagttggtaataccagaagtaggtagcttaaccgtttggagagcgcttcccaaggtaggactagcgattggggtgaagtcgtaacaaggtatccgtacgggaacgtgcggatggatcacctcctttct