Package ij.plugin
Class ZAxisProfiler
java.lang.Object
ij.plugin.ZAxisProfiler
- All Implemented Interfaces:
PlotMaker
,Measurements
,PlugIn
public class ZAxisProfiler extends Object implements PlugIn, Measurements, PlotMaker
Implements the Image/Stacks/Plot Z-axis Profile command,
which plots the selection mean gray value versus slice number.
-
Field Summary
Fields inherited from interface ij.measure.Measurements
ADD_TO_OVERLAY, ALL_STATS, AREA, AREA_FRACTION, CENTER_OF_MASS, CENTROID, CIRCULARITY, ELLIPSE, FERET, INTEGRATED_DENSITY, INVERT_Y, KURTOSIS, LABELS, LIMIT, MAX_STANDARDS, MEAN, MEDIAN, MIN_MAX, MODE, NaN_EMPTY_CELLS, PERIMETER, RECT, SCIENTIFIC_NOTATION, SHAPE_DESCRIPTORS, SKEWNESS, SLICE, STACK_POSITION, STD_DEV
-
Constructor Summary
Constructors Constructor Description ZAxisProfiler()
-
Method Summary
Modifier and Type Method Description Plot
getPlot()
Returns a profile plot.static Plot
getPlot(ImagePlus imp)
Returns a Plot of the selection mean gray value versus slice number.static Plot
getPlot(ImagePlus imp, String options)
Returns a Plot of the selection mean versus slice number for the specified hyperstack, where 'options' can be "time" or "z-axis".ImagePlus
getSourceImage()
Returns the ImagePlus used to generate the profile plots.void
run(String arg)
This method is called when the plugin is loaded.
-
Constructor Details
-
ZAxisProfiler
public ZAxisProfiler()
-
-
Method Details
-
getPlot
Returns a Plot of the selection mean gray value versus slice number. -
getPlot
Returns a Plot of the selection mean versus slice number for the specified hyperstack, where 'options' can be "time" or "z-axis". -
run
Description copied from interface:PlugIn
This method is called when the plugin is loaded. 'arg', which may be blank, is the argument specified for this plugin in IJ_Props.txt. -
getPlot
Description copied from interface:PlotMaker
Returns a profile plot. -
getSourceImage
Description copied from interface:PlotMaker
Returns the ImagePlus used to generate the profile plots.- Specified by:
getSourceImage
in interfacePlotMaker
-